Co-localization of CENP-C and CENP-H to discontinuous domains of CENP-A chromatin at human neocentromeres

The distribution of centromeric chromatin-associated proteins across human neocentromeric DNA shows that this chromatin consists of several CENP-A-containing sub-domains

What is memory? The present state of the engram

The mechanism of memory remains one of the great unsolved problems of biology. Grappling with the question more than a hundred years ago, the German zoologist Richard Semon formulated the concept of the engram, lasting connections in the brain that result from simultaneous "excitations", whose precise physical nature and consequences were out of reach of the biology of his day. Neuroscientists now have the knowledge and tools to tackle this question, however, and this Forum brings together leading contemporary views on the mechanisms of memory and what the engram means today

Word meaning and lexical pragmatics

In spite of their differences, Two-level Conceptual Semantics, Generative Lexicon Theory and Relevance Theory also have similarities with respect to treatment of the relation of word meanings and contexts. Therefore, the three theories can be considered as complementing each other in analysing word meanings in utterances. In the present paper I will outline a conception of lexical pragmatics which critically amalgamates the views of these theories and has more explanatory power than each theory does separately. Such a lexical pragmatic conception accepts lexical-semantic representations which can be radically underspecified and allow for other methods of meaning description than componential analysis. As words have underspecified meaning representations, they reach their full meanings in corresponding contexts (immediate or extended) through considerable pragmatic inference. The Cognitive Principle of Relevance regulates the way in which the utterance meaning is construed

Developing an instrument to assess the endoscopic severity of ulcerative colitis : The Ulcerative Colitis Endoscopic Index of Severity (UCEIS)

Full list of Investigators is given at the end of the article.Background: Variability in endoscopic assessment necessitates rigorous investigation of descriptors for scoring severity of ulcerative colitis (UC). Objective: To evaluate variation in the overall endoscopic assessment of severity, the intra- and interindividual variation of descriptive terms and to create an Ulcerative Colitis Endoscopic Index of Severity which could be validated. Design: A two-phase study used a library of 670 video sigmoidoscopies from patients with Mayo Clinic scores 0-11, supplemented by 10 videos from five people without UC and five hospitalised patients with acute severe UC. In phase 1, each of 10 investigators viewed 16/24 videos to assess agreement on the Baron score with a central reader and agreed definitions of 10 endoscopic descriptors. In phase 2, each of 30 different investigators rated 25/60 different videos for the descriptors and assessed overall severity on a 0-100 visual analogue scale. κ Statistics tested inter- and intraobserver variability for each descriptor. A general linear mixed regression model based on logit link and β distribution of variance was used to predict overall endoscopic severity from descriptors. Results: There was 76% agreement for 'severe', but 27% agreement for 'normal' appearances between phase I investigators and the central reader. In phase 2, weighted κ values ranged from 0.34 to 0.65 and 0.30 to 0.45 within and between observers for the 10 descriptors. The final model incorporated vascular pattern, (normal/patchy/ complete obliteration) bleeding (none/mucosal/luminal mild/luminal moderate or severe), erosions and ulcers (none/erosions/superficial/deep), each with precise definitions, which explained 90% of the variance (pR2, Akaike Information Criterion) in the overall assessment of endoscopic severity, predictions varying from 4 to 93 on a 100-point scale (from normal to worst endoscopic severity). Conclusion: The Ulcerative Colitis Endoscopic Index of Severity accurately predicts overall assessment of endoscopic severity of UC. Validity and responsiveness need further testing before it can be applied as an outcome measure in clinical trials or clinical practice.publishersversionPeer reviewe

Familial hypercholesterolaemia in children and adolescents from 48 countries: a cross-sectional study

Background: Approximately 450 000 children are born with familial hypercholesterolaemia worldwide every year, yet only 2·1% of adults with familial hypercholesterolaemia were diagnosed before age 18 years via current diagnostic approaches, which are derived from observations in adults. We aimed to characterise children and adolescents with heterozygous familial hypercholesterolaemia (HeFH) and understand current approaches to the identification and management of familial hypercholesterolaemia to inform future public health strategies. Methods: For this cross-sectional study, we assessed children and adolescents younger than 18 years with a clinical or genetic diagnosis of HeFH at the time of entry into the Familial Hypercholesterolaemia Studies Collaboration (FHSC) registry between Oct 1, 2015, and Jan 31, 2021. Data in the registry were collected from 55 regional or national registries in 48 countries. Diagnoses relying on self-reported history of familial hypercholesterolaemia and suspected secondary hypercholesterolaemia were excluded from the registry; people with untreated LDL cholesterol (LDL-C) of at least 13·0 mmol/L were excluded from this study. Data were assessed overall and by WHO region, World Bank country income status, age, diagnostic criteria, and index-case status. The main outcome of this study was to assess current identification and management of children and adolescents with familial hypercholesterolaemia. Findings: Of 63 093 individuals in the FHSC registry, 11 848 (18·8%) were children or adolescents younger than 18 years with HeFH and were included in this study; 5756 (50·2%) of 11 476 included individuals were female and 5720 (49·8%) were male. Sex data were missing for 372 (3·1%) of 11 848 individuals. Median age at registry entry was 9·6 years (IQR 5·8-13·2). 10 099 (89·9%) of 11 235 included individuals had a final genetically confirmed diagnosis of familial hypercholesterolaemia and 1136 (10·1%) had a clinical diagnosis. Genetically confirmed diagnosis data or clinical diagnosis data were missing for 613 (5·2%) of 11 848 individuals. Genetic diagnosis was more common in children and adolescents from high-income countries (9427 [92·4%] of 10 202) than in children and adolescents from non-high-income countries (199 [48·0%] of 415). 3414 (31·6%) of 10 804 children or adolescents were index cases. Familial-hypercholesterolaemia-related physical signs, cardiovascular risk factors, and cardiovascular disease were uncommon, but were more common in non-high-income countries. 7557 (72·4%) of 10 428 included children or adolescents were not taking lipid-lowering medication (LLM) and had a median LDL-C of 5·00 mmol/L (IQR 4·05-6·08). Compared with genetic diagnosis, the use of unadapted clinical criteria intended for use in adults and reliant on more extreme phenotypes could result in 50-75% of children and adolescents with familial hypercholesterolaemia not being identified. Interpretation: Clinical characteristics observed in adults with familial hypercholesterolaemia are uncommon in children and adolescents with familial hypercholesterolaemia, hence detection in this age group relies on measurement of LDL-C and genetic confirmation. Where genetic testing is unavailable, increased availability and use of LDL-C measurements in the first few years of life could help reduce the current gap between prevalence and detection, enabling increased use of combination LLM to reach recommended LDL-C targets early in life

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3 - Meeting Abstracts - Antwerp, Belgium. 15–20 July 2017

This work was produced as part of the activities of FAPESP Research,\ud Disseminations and Innovation Center for Neuromathematics (grant\ud 2013/07699-0, S. Paulo Research Foundation). NLK is supported by a\ud FAPESP postdoctoral fellowship (grant 2016/03855-5). ACR is partially\ud supported by a CNPq fellowship (grant 306251/2014-0)

Internet Video Transmission

The Internet has rapidly evolved from being a scientific experiment to a commercial network connecting millions of hosts that carries traffic generated by a large amount of applications with diverse requirements. Its architecture was however designed to enable efficient point-to-point delivery of bulk data, and can not provide statistical guarantees on the timely delivery of delay sensitive data such as streaming and real-time multimedia. Thus, applications that require low loss probabilities in today's Internet have to use some end-to-end error recovery mechanism. For delay sensitive applications the introduced latency by the applied schemes has to be low as well. Traffic control functions such as delay limited shaping and forward error correction (FEC), and multiple description coding (MDC) have been proposed for variable bitrate video. Their major drawback is, however, that it is difficult to predict their efficiency, as it depends on many factors like the characteristics of the stream itself, the characteristics of the traffic in the network and the network parameters. Consequently, it is difficult to decide which control mechanisms to employ, how to combine them and to choose the right parameters (e.g. block length, code rate) for optimal performance. In this thesis we present results on the efficiency of traffic control functions and MDC for video transmission based on mathematical models and simulations. We investigate the efficiency of delay limited traffic shaping and the trade-offs in the joint use of traffic shaping and forward error correction. We identify the packet size distribution of the traffic in the network as an additional factor that may influence the efficiency of FEC, and present a thorough analysis of its possible effects. We present an analytical comparison of MDC versus media-dependent FEC and media-independent FEC, and based on the results we conclude that MDC is a promising error control solution for multimedia communications with very strict delay bounds in an environment with bursty losses. We combine the analytical results with traces from measurements performed on the Internet to evaluate how efficient these error control schemes are under real loss patterns. We compare the efficiency of MDC and media-dependent FEC in the presence of channel estimation errors; we propose a new rate allocation method, which is robust to mis-estimations of the channel state and which improves error resilience on non-stationary channels. Finally we present an analytical model of the performance of an end-point-based multimedia streaming architecture based on multiple distribution trees and forward error correction, and analyze the behavior of the architecture for a large number of nodes.QC 2010111